{"id":14,"date":"2016-04-05T21:59:11","date_gmt":"2016-04-05T21:59:11","guid":{"rendered":"http:\/\/projects.nib.si\/decomb\/?page_id=14"},"modified":"2020-11-20T09:58:03","modified_gmt":"2020-11-20T08:58:03","slug":"summary","status":"publish","type":"page","link":"https:\/\/projects.nib.si\/decomb\/summary\/","title":{"rendered":"Project overview"},"content":{"rendered":"<p style=\"text-align: left\"><em><strong>Oceans<\/strong><\/em> and <strong><em>seas<\/em> <\/strong>are the largest ecosystem on Earth and are constantly subjected to multiple <em><strong>natural <\/strong><\/em>and<em> <strong>anthropogenic perturbations<\/strong> <\/em>that are projected to increase in the future, with possible important implications for the global climate. The complex pool of marine <strong><em>dissolved organic matter<\/em> <\/strong>(DOM) &#8211; one of the largest reservoirs of carbon in the biosphere \u2013 is almost exclusively accessible to diverse members of the <strong><em>marine microbial community<\/em><\/strong> carrying out different types of metabolisms to process the broad spectrum of compounds present in this oceanic DOM pool. Thus, microbes with their high metabolic activity and abundance have a major impact on the <strong><em>biogeochemical state<\/em><\/strong> of the ocean. Hence, to predict the response of the marine ecosystems to natural\/anthropogenic perturbations, a <strong><em>mechanistic understanding<\/em> <\/strong>on the relation between the organic matter field and the metabolic network operated by the microbial community is required.<\/p>\n<p>One major perturbation to the marine ecosystem (and its services) is <strong><em>bloom-forming gelatinous marine zooplankton<\/em><\/strong> or \u2018<em><strong>jellyfish<\/strong>\u2019<\/em>. Regardless the debate over the accuracy of their reported global increase and on the true cause of the observed fluctuations in abundance of jellyfish, the increase in their population size can have serious<em> <strong>ecological<\/strong><\/em> and detrimental <strong><em>socio-economic consequences<\/em><\/strong>, especially in coastal marine ecosystems. The <strong><em>invasive ctenophore <\/em><\/strong><strong><em>Mnemiopsis leiydi<\/em><\/strong> is one of those <em>jellyfish<\/em> species that is still spreading and increasing in population size, with large impact on the ecosystems it invades. Ever since its introduction to the commercially important northern Adriatic coastal zone in the year 2016, <em>M. leiydi<\/em> forms large-scale blooms. Yet, the implications of the introduction of this invasive ctenophore for this dynamic coastal marine ecosystem, remain unknown.<\/p>\n<p><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" data-attachment-id=\"365\" data-permalink=\"https:\/\/projects.nib.si\/decomb\/summary\/ml_bloom\/\" data-orig-file=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2020\/11\/ML_bloom-e1605868242483.jpg?fit=800%2C533&amp;ssl=1\" data-orig-size=\"800,533\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;10&quot;,&quot;credit&quot;:&quot;Evan K D&#039;Alessandro&quot;,&quot;camera&quot;:&quot;Canon EOS 7D&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;1393957413&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;18&quot;,&quot;iso&quot;:&quot;200&quot;,&quot;shutter_speed&quot;:&quot;0.004&quot;,&quot;title&quot;:&quot;&quot;,&quot;orientation&quot;:&quot;1&quot;}\" data-image-title=\"ML_bloom\" data-image-description=\"\" data-image-caption=\"\" data-large-file=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2020\/11\/ML_bloom-e1605868242483.jpg?fit=1024%2C682&amp;ssl=1\" class=\"alignnone size-medium wp-image-365 alignright\" src=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2020\/11\/ML_bloom.jpg?resize=300%2C200\" alt=\"ML_bloom\" width=\"300\" height=\"200\" \/>In particular, as its <strong><em>massive blooms<\/em><\/strong> start to <strong><em>decay<\/em><\/strong>, sinking ctenophore detritus represents a <strong><em>major perturbation<\/em> <\/strong>and a largely overlooked, but <strong><em>significant<\/em> <em>source of DOM <\/em><\/strong>for <strong><em>ambient microbial communities.<\/em><\/strong> The link between jellyfish and microbes has been addressed by only a few studies thus far, demonstrating that <strong><em>jellyfish detritus<\/em><\/strong> is <strong><em>rapidly degraded by opportunistic<\/em><\/strong>, even potentially pathogenic, <strong><em>microbial phylotypes<\/em><\/strong> with possible implications for the <strong><em>marine carbon <\/em><\/strong>and<strong><em> nitrogen cycle<\/em><\/strong>, marine <strong><em>food web structure<\/em><\/strong> and <em><strong>human health and wellbeing<\/strong><\/em>.\u00a0However, the exact processes and mechanisms of microbial degradation of the ctenophore detritus remain unclear and\u00a0need to be investigated to understand the implications of invasive ctenophore blooms for the biogeochemical state of the invaded ecosystem.<\/p>\n<p>&nbsp;<\/p>\n<p style=\"text-align: left\">We will apply an <strong><em>integrated interdisciplinary approach<\/em><\/strong> to tackle this problem \u2013 <strong><em>from the molecular to the ecosystem scale<\/em><\/strong>. We will <em><strong>characterize the ctenophore OM<\/strong><\/em> using state-of-the-art analytical tools and link it to the <strong><em>metabolic processes operated by the ctenophore-degrading microbial community<\/em><\/strong> using cutting edge -omics techniques combining the emerging fields of marine <strong><em>meta- and exo-proteomics<\/em><\/strong> with the <strong><em>metagenomic approach<\/em><\/strong>. The remineralization rates of specific ctenophore-OM compounds will be determined <em>via<\/em> <strong><em>biochemical characterization of key microbial enzymes<\/em><\/strong>. The implications of the microbially-mediated degradation of different bloom-forming gelatinous zooplankton detritus for the surrounding ecosystem will be evaluated. The relationships between all involved processes and players will be established using <strong><em>physical model<\/em><\/strong> and extended to the <strong><em>physical-biogeochemical model<\/em><\/strong> to perform case studies in <strong><em>realistic spatial and temporal context<\/em><\/strong>. Altogether, this knowledge will enable us understanding the <strong><em>implications of jellyfish blooms on marine biogeochemical cycles<\/em><\/strong>, to predict the <strong><em>response of marine ecosystems<\/em> <\/strong>to this perturbation and allow us to search for <strong><em>mitigation measures for jellyfish blooms<\/em><\/strong> and its effects on <strong><em>coastal seas&#8217; ecosystem services<\/em> <\/strong>including human health and wellbeing.<\/p>\n<p style=\"text-align: left\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" data-attachment-id=\"373\" data-permalink=\"https:\/\/projects.nib.si\/decomb\/summary\/ml_bloom_tt\/\" data-orig-file=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?fit=1600%2C1200&amp;ssl=1\" data-orig-size=\"1600,1200\" data-comments-opened=\"1\" data-image-meta=\"{&quot;aperture&quot;:&quot;0&quot;,&quot;credit&quot;:&quot;&quot;,&quot;camera&quot;:&quot;&quot;,&quot;caption&quot;:&quot;&quot;,&quot;created_timestamp&quot;:&quot;0&quot;,&quot;copyright&quot;:&quot;&quot;,&quot;focal_length&quot;:&quot;0&quot;,&quot;iso&quot;:&quot;0&quot;,&quot;shutter_speed&quot;:&quot;0&quot;,&quot;title&quot;:&quot;&quot;,&quot;orientation&quot;:&quot;0&quot;}\" data-image-title=\"ML_bloom_TT\" data-image-description=\"\" data-image-caption=\"\" data-large-file=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?fit=1024%2C768&amp;ssl=1\" class=\"alignnone size-medium wp-image-373\" src=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?resize=300%2C225\" alt=\"ML_bloom_TT\" width=\"300\" height=\"225\" srcset=\"https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?resize=300%2C225&amp;ssl=1 300w, https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?resize=768%2C576&amp;ssl=1 768w, https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?resize=1024%2C768&amp;ssl=1 1024w, https:\/\/i0.wp.com\/projects.nib.si\/decomb\/wp-content\/uploads\/sites\/30\/2016\/04\/ML_bloom_TT.jpg?w=1600&amp;ssl=1 1600w\" sizes=\"auto, (max-width: 300px) 100vw, 300px\" \/><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Oceans and seas are the largest ecosystem on Earth and are constantly subjected to multiple natural and anthropogenic perturbations that are projected to increase in the future, with possible important implications for the global climate. The complex pool of marine dissolved organic matter (DOM) &#8211; one of the largest reservoirs of carbon in the biosphere [&hellip;]<\/p>\n","protected":false},"author":3,"featured_media":0,"parent":0,"menu_order":2,"comment_status":"closed","ping_status":"closed","template":"page-fullwidth.php","meta":{"footnotes":""},"class_list":["post-14","page","type-page","status-publish","hentry"],"jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/P7OqMV-e","jetpack-related-posts":[],"_links":{"self":[{"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/pages\/14","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/users\/3"}],"replies":[{"embeddable":true,"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/comments?post=14"}],"version-history":[{"count":27,"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/pages\/14\/revisions"}],"predecessor-version":[{"id":377,"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/pages\/14\/revisions\/377"}],"wp:attachment":[{"href":"https:\/\/projects.nib.si\/decomb\/wp-json\/wp\/v2\/media?parent=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}