Publications resulting from the project:
Journal publications
FERNÁNDEZ, Rubèn Mateos, PETEK, Marko, JUTERŠEK, Mojca, GERASYMENKO, Iryna, BAEBLER, Špela, KALLAM, Kalyani, GIMENÉZ, Elena Moreno, GONDOLF, Janine, NORDMANN, Alfred, GRUDEN, Kristina, ORZAEZ, Diego, PATRON, Nicola. Insect pest management in the age of synthetic biology. Plant biotechnology journal. 2022, iss. 1, vol. 20, str. 25-36, ilustr. ISSN 1467-7644. https://onlinelibrary.wiley.com/doi/10.1111/pbi.13685, doi: 10.1111/pbi.13685. [COBISS.SI-ID 81340163]
PETEK, Marko, COLL RIUS, Anna, FERENC, Rok, RAZINGER, Jaka, GRUDEN, Kristina. Validating the potential of double-stranded RNA targeting Colorado potato beetle mesh gene in laboratory and field trials. Frontiers in plant science, ISSN 1664-462X, 2020, str. 1-18, doi: 10.3389/fpls.2020.01250. [COBISS.SI-ID 25419523]
SCHOVILLE, Sean D., CHEN, Yolanda H., ANDERSSON, Martin N., BENOIT, Joshua B., BHANDARI, Anita, BOWSHER, Julia H., BREVIK, Kristian, CAPPELLE, Kaat, CHEN, Mei-Ju M., CHILDERS, Anna K., GRUDEN, Kristina, PETEK, Marko, et al. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). Scientific reports, ISSN 2045-2322, 2018, vol. 8, str. 1-18, ilustr. http://dx.doi.org/10.1038/s41598-018-20154-1, doi: 10.1038/s41598-018-20154-1. [COBISS.SI-ID 4626767]
BAEBLER, Špela, SVALINA, Miha, PETEK, Marko, STARE, Katja, ROTTER, Ana, POMPE NOVAK, Maruša, GRUDEN, Kristina. quantGenius: implementation of a decision support system for qPCR-based gene quantification. BMC bioinformatics, ISSN 1471-2105, 2017, vol. 18, str. 1-11, ilustr.https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-017-1688-7, doi: 10.1186/s12859-017-1688-7. [COBISS.SI-ID 4351055]
Preprints
PETEK, Marko, COLL, Anna, FERENC, Rok, RAZINGER, Jaka, GRUDEN, Kristina. Validating the potential of double-stranded RNA targeting Colorado potato beetle mesh gene in laboratory and field trials. bioRxiv 2020.02.13.945097; doi: https://doi.org/10.1101/2020.02.13.945097; Supplementary Datasets 1-13
Sean D. Schoville, Yolanda H. Chen, Martin N. Andersson, Joshua B. Benoit, Anita Bhandari, Julia H. Bowsher, Kristian Brevik, Kaat Cappelle, Mei-Ju M. Chen, Anna K. Childers, Christopher Childers, Olivier Christiaens, Justin Clements, Elise M. Didion, Elena N. Elpidina, Patamarerk Engsontia, Markus Friedrich, Inmaculada García-Robles, Richard A. Gibbs, Chandan Goswami, Alessandro Grapputo, Kristina Gruden, Marcin Grynberg, Bernard Henrissat, Emily C. Jennings, Jeffery W. Jones, Megha Kalsi, Sher A. Khan, Abhishek Kumar, Fei Li, Vincent Lombard, Xingzhou Ma, Alexander Martynov, Nicholas J. Miller, Robert F. Mitchell, Monica Munoz-Torres, Anna Muszewska, Brenda Oppert, Subba Reddy Palli, Kristen A. Panfilio, Yannick Pauchet, Lindsey C. Perkin, Marko Petek, Monica F. Poelchau, Éric Record, Joseph P. Rinehart, Hugh M. Robertson, Andrew J. Rosendale, Victor M. Ruiz-Arroyo, Guy Smagghe, Zsofia Szendrei, Gregg W.C. Thomas, Alex S. Torson, Iris M. Vargas Jentzsch, Matthew T. Weirauch, Ashley D. Yates, George D. Yocum, June-Sun Yoon & Stephen Richards. A model species for agricultural pest genomics: The genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae). bioRxiv 192641; doi: https://doi.org/10.1101/192641
Conference abstracts
PETEK, Marko, GRUDEN, Kristina. Testing the activity of double-stranded RNAs against Colorado potato beetle. V: RNAi: the future of crosstalk: focus on RNAi Technology (WG1) and Applications (WG2): iPLANTA COST Action CA15223: abstract book, 2nd iPLANTA Conference, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland, February, 14-16, 2018. [S. l.: s. n. 2018], str. 29. [COBISS.SI-ID 4623183]
TUMBAS ŠAPONJAC, Vesna, PETEK, Marko, PAIVA, J.A.P. One year of short-term scientific mission in the frame of the COST action 15223 : developing synergies, competencies and skills on RNAi. V: RNAi: the future of crosstalk : focus on RNAi Technology (WG1) and Applications (WG2): iPLANTA COST Action CA15223: abstract book, 2nd iPLANTA Conference, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland, February, 14-16, 2018. [S. l.: s. n. 2018], str. 49. [COBISS.SI-ID 4623439]
PETEK, Marko, GRUDEN, Kristina. Testing double-stranded RNAs for crop protection against Colorado Potato Beetle. V: Three-way interactions between plants, microbes and arthropods: impacts, mechanisms and utilisation, 3rd Annual Meeting of the COST Action FA1405 in collaboration with Institute of Earth Systems University of Malta, 24-26 January, 2018, Malta. [S. l.: s. n. 2018], str. 27. [COBISS.SI-ID 4624207]
PETEK, Marko, GRUDEN, Kristina. Development of RNAi-based pesticides targeting Colorado potato beetle. V: GORIČAR, Katja (ur.), HUDLER, Petra (ur.). Book of abstracts = Zbornik povzetkov, 12th Meeting of the Slovenian Biochemical Society with International Participation = 12. srečanje Slovenskega biokemijskega društva z mednarodno udeležbo, Bled 20 – 23 september 2017. Ljubljana: Slovenian Biochemical Society. 2017, str. 52. [COBISS.SI-ID 4452943]
BAEBLER, Špela, SVALINA, Miha, PETEK, Marko, STARE, Katja, ROTTER, Ana, POMPE NOVAK, Maruša, GRUDEN, Kristina. QuantGenius : implementation of a decision support system for qPCR-based gene quantification. V: GORIČAR, Katja (ur.), HUDLER, Petra (ur.). Book of abstracts = Zbornik povzetkov, 12th Meeting of the Slovenian Biochemical Society with International Participation = 12. srečanje Slovenskega biokemijskega društva z mednarodno udeležbo, Bled 20 – 23 september 2017. Ljubljana: Slovenian Biochemical Society. 2017, str. 185. [COBISS.SI-ID 4458063]
PETEK, Marko, GRUDEN, Kristina. Selection and validation of novel targets for RNAi-based control of Colorado potato beetle. In: Creating the plant RNAi research network: Cost Action CA15223: book of abstracts, 1st Cost iPlanta Conference, February 15-17, 2017, University Sapienza and CNR Headquarters, Rome, Italy. [S. l.: s. n., 2017]. http://iplanta.univpm.it/sites/iplanta.univpm.it/files/Book%20of%20abstracts%20IPlanta%20Rome.pdf. [COBISS.SI-ID 4249679]
Interviews
PETEK, Marko. Nova generacija pesticidov na osnovi RNA interference. Tromba : agencija za promocijo znanosti, kreativnosti in inovativnosti, ISSN 2350-5869, 17. jul. 2017. http://www.tromba.si/dr-marko-petek-nib-nova-generacija-pesticidov-na-osnovi-rna-interference/. [COBISS.SI-ID 4375119]
DACINGER, Renata (oseba, ki intervjuva), ČUČEK, Anja (oseba, ki intervjuva, scenarist), GRUDEN, Kristina (intervjuvanec), SABOTIČ, Jerica (intervjuvanec), PETEK, Marko (intervjuvanec), POLAJNAR, Jernej (intervjuvanec), KUZMAN, Uroš (intervjuvanec). Naravno proti škodljivcem, (Ugriznimo znanost). Ljubljana: Radiotelevizija Slovenija javni zavod, 2017. http://4d.rtvslo.si/arhiv/ugriznimo-znanost/174477226. [COBISS.SI-ID 4356175]
Previous publications of the project’s working group related to this project:
Šmid I, Gruden K, Buh Gašparič M et al. (2013). Inhibition of the growth of Colorado potato beetle larvae by macrocypins, protease inhibitors from the parasol mushroom.
Journal of Agricultural Food Chemisty, 61, 12499-509.