Publications:
Controlling gene expression with deep generative design of regulatory DNA
Zrimec, Jan ; Fu, Xiaozhi ; Sheikh Muhammad, Azam ; Skrekas, Christos ; Jauniskis, Vykintas ; Speicher, Nora K. ; Börlin, Christoph S. ; Verendel, Vilhelm ; Chehreghani, Morteza Haghir ; Dubhashi, Devdatt P. ; Siewers, Verena ; Fitz, Florian David ; Nielsen, Jens ; Zelezniak, Aleksej
Type of work: 1.01 original scientific article
Year: 2022
Source: Nature communications [Elektronski vir]. – ISSN 2041-1723. – Vol. 13, str. 1-17
COBISS.SI-ID 120155139
Toward learning the principles of plant gene regulation
Zrimec, Jan ; Zelezniak, Aleksej ; Gruden, Kristina
Type of work: 1.03 short scientific article
Year: 2022
Source: Trends in Plant Science. – ISSN 1360-1385. – Vol. 27, iss. 12, str. 1206-1208
COBISS.SI-ID 123482371
Learning deep representations of enzyme thermal adaptation
Li, Gang ; Buric, Filip ; Zrimec, Jan ; Viknander, Sandra ; Nielsen, Jens ; Zelezniak, Aleksej ; Engqvist, Martin K. M.
Type of work: 1.01 original scientific article
Year: 2022
Source: Protein science [Elektronski vir]. – ISSN 1469-896X. – Vol. 31, iss. 12, 1-14 str.
COBISS.SI-ID 130304771
Conference presentations:
A multiorgan model of potato primary and secondary metabolism captures the principles of plant growth and defence [Elektronski vir]
Type of work: 1.12 published scientific conference contribution abstract
Year: 2022
Source: Solanaceae 2022 [Elektronski vir]. – Str. 176
COBISS.SI-ID 130292227
Experimental evidence and community-based revision of potato gene models with automated and manual curation [Elektronski vir]
Type of work: 1.12 published scientific conference contribution abstract
Year: 2022
Source: Solanaceae 2022 [Elektronski vir]. – Str. 65
COBISS.SI-ID 130285315
TGACG-binding (TGA) transcription factors in potato (Solanum tuberosum L.) [Elektronski vir]
Tomaž, Špela ; Petek, Marko ; Lukan, Tjaša ; Pogačar, Karmen ; Stare, Katja ; Teixeira Prates, Erica ; Jacobson, Daniel A. ; Zrimec, Jan ; Bajc, Gregor ; Butala, Matej ; Pompe Novak, Maruša ; Taler-Verčič, Ajda ; Usenik, Aleksandra ; Turk, Dušan ; Coll Rius, Anna ; Gruden, Kristina
Type of work: 1.12 published scientific conference contribution abstract
Year: 2022
Source: Plants in Changing Environment [Elektronski vir] : International Conference of the Slovenian Society of Plant Biology; Biotechnical Faculty, University of Ljubljana, September 15-16, 2022, Ljubljana, Slovenia; [book of abstracts]. – str. 38
COBISS.SI-ID 121574915
Systems biology for understanding immunity responses in potato [Elektronski vir]
Type of work: 1.12 published scientific conference contribution abstract
Year: 2022
Source: Models in population dynamics, ecology and evolution. – Str. 88
COBISS.SI-ID 116857347